{
  "_id": "6a1f1e9eb401979e7341fe89",
  "Package": "marcher",
  "Type": "Package",
  "Title": "Migration and Range Change Estimation in R",
  "Version": "0.0.3",
  "Date": "2020-04-27",
  "Authors@R": "c(person(\"Eliezer\", \"Gurarie\", role = c(\"aut\", \"cre\"), email = \"egurarie@umd.edu\"), person(\"Faridedin\", \"Cheraghi\", role = \"ctb\"))",
  "Description": "A set of tools for likelihood-based estimation, model\nselection and testing of two- and three-range shift and\nmigration models for animal movement data as described in\nGurarie et al. (2017) <doi: 10.1111/1365-2656.12674>.  Provided\nmovement data (X, Y and Time), including irregularly sampled\ndata, functions estimate the time, duration and location of one\nor two range shifts, as well as the ranging area and\nauto-correlation structure of the movment.  Tests assess, for\nexample, whether the shift was \"significant\", and whether a\ntwo-shift migration was a true return migration.",
  "License": "GPL-2",
  "VignetteBuilder": "knitr",
  "BugReports": "https://github.com/EliGurarie/marcher/issues",
  "RoxygenNote": "7.3.1",
  "Repository": "https://eligurarie.r-universe.dev",
  "Date/Publication": "2024-06-18 10:47:53 UTC",
  "RemoteUrl": "https://github.com/eligurarie/marcher",
  "RemoteRef": "HEAD",
  "RemoteSha": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-16 08:16:46 UTC",
    "User": "root"
  },
  "Author": "Eliezer Gurarie [aut, cre],\nFaridedin Cheraghi [ctb]",
  "Maintainer": "Eliezer Gurarie <egurarie@umd.edu>",
  "MD5sum": "e0708f7431c5a73f58ea46d603bda586",
  "_user": "eligurarie",
  "_type": "src",
  "_file": "marcher_0.0.3.tar.gz",
  "_fileid": "b21d49defe9f19daefd8ede14f830d5479a2cded9cce270da3032ad48a97df20",
  "_filesize": 2295912,
  "_sha256": "b21d49defe9f19daefd8ede14f830d5479a2cded9cce270da3032ad48a97df20",
  "_created": "2026-05-16T08:16:46.000Z",
  "_published": "2026-06-02T18:19:10.894Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79141583359,
      "time": 151,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7031899338"
    },
    {
      "job": 79141583438,
      "time": 140,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7031898341"
    },
    {
      "job": 79141583534,
      "time": 153,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7031901930"
    },
    {
      "job": 79141583840,
      "time": 194,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7031906052"
    },
    {
      "job": 79141582787,
      "time": 152,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7031884097"
    },
    {
      "job": 79141582673,
      "time": 104,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7366248793"
    },
    {
      "job": 79141583653,
      "time": 100,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7031894382"
    },
    {
      "job": 79141584481,
      "time": 95,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7031893887"
    },
    {
      "job": 79141583691,
      "time": 100,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7031894287"
    }
  ],
  "_buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/eligurarie/marcher",
  "_commit": {
    "id": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
    "author": "Elie Gurarie <egurarie@umd.edu>",
    "committer": "Elie Gurarie <egurarie@umd.edu>",
    "message": "fix slight error\n",
    "time": 1718707673
  },
  "_maintainer": {
    "name": "Eliezer Gurarie",
    "email": "egurarie@umd.edu"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.3.0",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "Matrix",
      "role": "Imports"
    },
    {
      "package": "graphics",
      "role": "Imports"
    },
    {
      "package": "grDevices",
      "role": "Imports"
    },
    {
      "package": "plyr",
      "role": "Imports"
    },
    {
      "package": "mvtnorm",
      "role": "Imports"
    },
    {
      "package": "RColorBrewer",
      "role": "Imports"
    },
    {
      "package": "minpack.lm",
      "role": "Imports"
    },
    {
      "package": "zoo",
      "role": "Imports"
    },
    {
      "package": "numDeriv",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "gtools",
      "role": "Imports"
    },
    {
      "package": "lubridate",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "lubridate",
      "role": "Suggests"
    }
  ],
  "_owner": "eligurarie",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 6,
  "_contributors": [
    {
      "user": "faridcher",
      "count": 15,
      "uuid": 9982519
    },
    {
      "user": "elieguru",
      "count": 7,
      "uuid": 12075063
    }
  ],
  "_userbio": {
    "uuid": 3239417,
    "type": "user",
    "name": "Eli(e) Gurarie",
    "description": "Professor of Quantitative Wildlife Ecology\r\n"
  },
  "_downloads": {
    "count": 207,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/marcher"
  },
  "_devurl": "https://github.com/eligurarie/marcher",
  "_searchresults": 17,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/marcher.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/eligurarie/marcher",
  "_realowner": "eligurarie",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.0-2",
      "date": "2017-04-12"
    }
  ],
  "_exports": [
    "computeAIC",
    "estimate_shift",
    "fitNSD",
    "getArea",
    "getCov",
    "getLikelihood",
    "getMu",
    "getMu_multi",
    "getP.mu",
    "getRSI",
    "getTau",
    "locate_shift",
    "mvrnorm2",
    "quickfit",
    "scan_track",
    "selectModel",
    "simulate_shift",
    "test_rangeshift",
    "test_return",
    "test_stopover"
  ],
  "_datasets": [
    {
      "name": "Michela",
      "title": "Movement track of Michela, a roe deer",
      "object": "Michela",
      "file": "Michela.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "name",
        "id",
        "day",
        "x",
        "y",
        "time"
      ],
      "rows": 331,
      "table": true,
      "tojson": true
    },
    {
      "name": "MOU.3range",
      "title": "Simulated range shift tracks",
      "object": "SimulatedTracks",
      "file": "SimulatedTracks.rda",
      "class": [
        "track",
        "data.frame"
      ],
      "fields": [
        "T",
        "X",
        "Y"
      ],
      "rows": 200,
      "table": true,
      "tojson": true
    },
    {
      "name": "MOU.sim",
      "title": "Simulated range shift tracks",
      "object": "SimulatedTracks",
      "file": "SimulatedTracks.rda",
      "class": [
        "track",
        "data.frame"
      ],
      "fields": [
        "T",
        "X",
        "Y"
      ],
      "rows": 100,
      "table": true,
      "tojson": true
    },
    {
      "name": "MOUF.sim",
      "title": "Simulated range shift tracks",
      "object": "SimulatedTracks",
      "file": "SimulatedTracks.rda",
      "class": [
        "track",
        "data.frame"
      ],
      "fields": [
        "T",
        "X",
        "Y"
      ],
      "rows": 100,
      "table": true,
      "tojson": true
    },
    {
      "name": "MOUF.sim.random",
      "title": "Simulated range shift tracks",
      "object": "SimulatedTracks",
      "file": "SimulatedTracks.rda",
      "class": [
        "track",
        "data.frame"
      ],
      "fields": [
        "T",
        "X",
        "Y"
      ],
      "rows": 100,
      "table": true,
      "tojson": true
    },
    {
      "name": "MWN.sim",
      "title": "Simulated range shift tracks",
      "object": "SimulatedTracks",
      "file": "SimulatedTracks.rda",
      "class": [
        "track",
        "data.frame"
      ],
      "fields": [
        "T",
        "X",
        "Y"
      ],
      "rows": 100,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "marcher-package",
      "title": "Migration and Range Change Analysis in R",
      "topics": [
        "marcher-package",
        "marcher"
      ]
    },
    {
      "page": "estimate_shift",
      "title": "Estimating range shifts",
      "topics": [
        "estimate_shift"
      ]
    },
    {
      "page": "fitNSD",
      "title": "Test range shift using net-squared displacement",
      "topics": [
        "fitNSD"
      ]
    },
    {
      "page": "getArea",
      "title": "Compute area",
      "topics": [
        "getArea"
      ]
    },
    {
      "page": "getCov",
      "title": "Estimation Helper Functions",
      "topics": [
        "getCov",
        "mvrnorm2"
      ]
    },
    {
      "page": "getLikelihood",
      "title": "Estimate likelihoods and AICs",
      "topics": [
        "getAIC.nls",
        "getLikelihood",
        "getLikelihood.res"
      ]
    },
    {
      "page": "getMu",
      "title": "Obtain mean vector for a range shift process",
      "topics": [
        "getMu",
        "getMu_multi"
      ]
    },
    {
      "page": "getRSI",
      "title": "Compute Range Shift Index",
      "topics": [
        "getRSI"
      ]
    },
    {
      "page": "getTau",
      "title": "Compute time scale parameters",
      "topics": [
        "getTau"
      ]
    },
    {
      "page": "locate_shift",
      "title": "Interactive locating of range shifting",
      "topics": [
        "locate_shift"
      ]
    },
    {
      "page": "Michela",
      "title": "Movement track of Michela, a roe deer",
      "topics": [
        "Michela"
      ]
    },
    {
      "page": "plot.shiftfit",
      "title": "Plot results of an range-shift fit",
      "topics": [
        "plot.shiftfit"
      ]
    },
    {
      "page": "quickfit",
      "title": "Quick fit of one-step migration",
      "topics": [
        "quickfit"
      ]
    },
    {
      "page": "scan_track",
      "title": "scan_track",
      "topics": [
        "scan_track"
      ]
    },
    {
      "page": "selectModel",
      "title": "Select residual model",
      "topics": [
        "selectModel"
      ]
    },
    {
      "page": "simulate_shift",
      "title": "Simulate MOUF process",
      "topics": [
        "simulate_shift"
      ]
    },
    {
      "page": "SimulatedTracks",
      "title": "Simulated range shift tracks",
      "topics": [
        "MOU.3range",
        "MOU.sim",
        "MOUF.sim",
        "MOUF.sim.random",
        "MWN.sim",
        "SimulatedTracks"
      ]
    },
    {
      "page": "test_rangeshift",
      "title": "Range shift hypothesis tests",
      "topics": [
        "test_rangeshift",
        "test_return",
        "test_stopover"
      ]
    }
  ],
  "_readme": "https://github.com/eligurarie/marcher/raw/HEAD/README.md",
  "_rundeps": [
    "cli",
    "cpp11",
    "farver",
    "generics",
    "glue",
    "gtools",
    "labeling",
    "lattice",
    "lifecycle",
    "lubridate",
    "magrittr",
    "Matrix",
    "minpack.lm",
    "mvtnorm",
    "numDeriv",
    "plyr",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "scales",
    "timechange",
    "viridisLite",
    "zoo"
  ],
  "_vignettes": [
    {
      "source": "marcher.Rmd",
      "filename": "marcher.html",
      "title": "Migration and range change estimation: the marcher package",
      "author": "Elie Gurarie and Farid Cheraghi",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Model description",
        "Mean process",
        "Ranging process",
        "Summaries",
        "Simulating range shift processes",
        "Estimating range shifts",
        "... in one line of code",
        "Details of the output",
        "Seeding parameters",
        "Residual analysis and autocorrelation model selection",
        "Example with roe deer data",
        "Entire track",
        "First migration",
        "Further statistics and hypothesis tests",
        "Migration distance and range shift index",
        "Range shift test",
        "Return test",
        "Stopover test",
        "Additional feature: net square displacement",
        "References"
      ],
      "created": "2017-02-22 22:04:22",
      "modified": "2020-04-28 04:51:08",
      "commits": 7
    }
  ],
  "_score": 4.707570176097937,
  "_indexed": true,
  "_nocasepkg": "marcher",
  "_universes": [
    "eligurarie"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.3",
      "date": "2026-05-16T08:18:58.000Z",
      "distro": "noble",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "8fb6ff0a9dc666fb699535f336a91c0f02f5a7d86ab3370c3af6c86a930e023a",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.0.3",
      "date": "2026-05-16T08:18:51.000Z",
      "distro": "noble",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "25733a0039b7076f47f0dabcd0d2b7fa1b981d530a2b7292f9daf3e3460c51d3",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.3",
      "date": "2026-05-16T08:19:41.000Z",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "f2ffab7a66414cb82c1a2f89721ae481c53c85d60b255322be5c366129998832",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.0.3",
      "date": "2026-05-16T08:20:19.000Z",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "2cf0564a478221d1df8d02fda44141bec039688c7e305622d54c341a25388ccf",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.3",
      "date": "2026-05-16T08:18:03.000Z",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "358b7d547c49d00bc60713be039910d6658af8b86d877675c6e1747cc33b171d",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.3",
      "date": "2026-05-16T08:18:00.000Z",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "aaf2b2495a8e5b5d3ff80d21327233e4f2059dc16c1222e1b1b0fdd85dccb6c3",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.0.3",
      "date": "2026-05-16T08:18:02.000Z",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "fc81d9e465737e146d0d2d4bb735d4b49c16c127fc4cf1c720febe2587284150",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.0.3",
      "date": "2026-06-02T18:18:49.000Z",
      "commit": "cfc2e9b3168fa16b300537c57ba929571cf7bade",
      "fileid": "765c3367d7cb9ad94632a467c20acb6f4fefa527fb6bd28c7c36c0ce511e4a63",
      "status": "success",
      "buildurl": "https://github.com/r-universe/eligurarie/actions/runs/25957057587"
    }
  ]
}